MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,488
rRNA: 11
tRNA: 69
tmRNA: 1
Total number of protein coding genes annotated/found:
4,263
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000281.1
MBF0835878.1
Genome Viewer
NA
AA
1062/354
2057-996
butyrate kinase
SEQF5047|JADGLP010000281.1
MBF0835879.1
Genome Viewer
NA
AA
957/319
3052-2096
phosphate butyryltransferase
SEQF5047|JADGLP010000281.1
MBF0835880.1
Genome Viewer
NA
AA
909/303
3234-4142
LD-carboxypeptidase
SEQF5047|JADGLP010000281.1
MBF0835881.1
Genome Viewer
NA
AA
984/328
4213-5196
M28 family peptidase
SEQF5047|JADGLP010000281.1
MBF0835882.1
Genome Viewer
NA
AA
426/142
5208-5633
SufE family protein
SEQF5047|JADGLP010000281.1
MBF0835883.1
Genome Viewer
NA
AA
780/260
6428-5649
CPBP family intramembrane metalloprotease
SEQF5047|JADGLP010000281.1
MBF0835884.1
Genome Viewer
NA
AA
972/324
7485-6514
bifunctional riboflavin kinase/FAD synthetase
SEQF5047|JADGLP010000281.1
MBF0835885.1
Genome Viewer
NA
AA
624/208
8120-7497
HAD family phosphatase
SEQF5047|JADGLP010000281.1
MBF0835886.1
Genome Viewer
NA
AA
2706/902
10815-8110
calcium-translocating P-type ATPase%2C PMCA-type
SEQF5047|JADGLP010000281.1
MBF0835887.1
Genome Viewer
NA
AA
165/55
11309-11473
rubredoxin
SEQF5047|JADGLP010000281.1
MBF0835888.1
Genome Viewer
NA
AA
174/58
11582-11755
hypothetical protein
SEQF5047|JADGLP010000281.1
MBF0835889.1
Genome Viewer
NA
AA
624/208
12147-12770
DUF3853 family protein
SEQF5047|JADGLP010000281.1
MBF0835890.1
Genome Viewer
NA
AA
2067/689
14819-12753
outer membrane beta-barrel protein
SEQF5047|JADGLP010000281.1
MBF0835891.1
Genome Viewer
NA
AA
1326/442
14933-16258
HAMP domain-containing histidine kinase
SEQF5047|JADGLP010000281.1
MBF0835892.1
Genome Viewer
NA
AA
396/132
16264-16659
response regulator
SEQF5047|JADGLP010000281.1
MBF0835893.1
Genome Viewer
NA
AA
1407/469
18588-17182
hypothetical protein
SEQF5047|JADGLP010000281.1
MBF0835894.1
Genome Viewer
NA
AA
1554/518
20152-18599
putative DNA binding domain-containing protein
SEQF5047|JADGLP010000281.1
MBF0835895.1
Genome Viewer
NA
AA
6816/2272
26971-20156
AAA family ATPase
SEQF5047|JADGLP010000281.1
MBF0835896.1
Genome Viewer
NA
AA
1191/397
28155-26965
hypothetical protein
SEQF5047|JADGLP010000281.1
MBF0835897.1
Genome Viewer
NA
AA
219/73
28471-28253
helix-turn-helix transcriptional regulator
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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